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- Constrained refinement
- Conventional cell
- Corresponding twins
- Coset
- Cromer–Mann coefficients
- Cross-section
- Crystal
- Crystal class
- Crystal family
- Crystal pattern
- Crystal structure
- Crystal system
- Crystallographic Information File
- Crystallographic Information Framework
- Crystallographic basis
- Crystallographic orbit
- Crystallographic symmetry
- Curie laws
- Cylindrical system
- D
- DDL
- D centred cell
- Derivative structure
- Detective quantum efficiency (DQE)
- Diadochy
- Dictionary definition language
- Difference Patterson map
- Diffraction symbol
- Direct lattice
- Direct methods
- Direct product
- Direct space
- Direction indices
- Displacive modulation
- Domain of influence
- Double coset
- Dual-space phase retrieval algorithms
- Dual basis
- Dynamic range
- Dynamical diffraction
- Dynamical theory
- E
- Eigensymmetry
- Electrocaloric effect
- Electron crystallography
- Electron density map
- Electron diffraction structure analysis (EDSA)
- Epitaxy
- Euclidean mapping
- Euhedral