Optical resolution
From Online Dictionary of Crystallography
Revision as of 15:00, 11 April 2008 by BrianMcMahon (talk | contribs)
By analogy with optical observations, e.g. in astronomy, the term optical resolution in structure determination, [math]d_\mathrm{opt}[/math], is used to describe the expected minimum distance between two resolved peaks in an electron-density map.
[math]d_\mathrm{opt} = [2(\sigma_\mathrm{Patt}^2 + \sigma_\mathrm{sph}^2)]^{1/2}[/math]
where [math]\sigma_\mathrm{Patt}[/math] is the standard deviation of the Gaussian function fitted to the Patterson origin peak, [math]\sigma_\mathrm{sph}[/math] is the standard deviation of the Gaussian function fitted to the origin peak of the spherical interference function, representing the Fourier transform of a sphere with radius [math]1/d_\mathrm{min}[/math], and [math]d_\mathrm{min}[/math] is the nominal resolution.
History
The term was introduced into the protein structure determination literature by Vaguine, A. A., Richelle, J. & Wodak, S. J. [(1999). Acta Cryst. D55, 191-205. SFCHECK: a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model].